Package Details: snakemake 6.4.1-1

Git Clone URL: (read-only, click to copy)
Package Base: snakemake
Description: Python-based language and execution environment for GNU Make-like workflows
Upstream URL:
Licenses: MIT
Submitter: kyleam
Maintainer: flying-sheep
Last Packager: flying-sheep
Votes: 7
Popularity: 0.003003
First Submitted: 2014-06-28 04:18
Last Updated: 2021-06-06 10:18

Dependencies (32)

Required by (0)

Sources (1)

Latest Comments

mschu commented on 2021-06-03 09:51

I can confirm @berquist's issue, the package does not install via yay for me with the same error.

berquist commented on 2021-05-29 00:22

I'm not sure if this is a problem with my setup, but the commit for 6.3.0 (d6d18cfd8ab8) doesn't seem to be on a branch? It clones directly into a detached HEAD state.

op3 commented on 2019-10-15 20:18

python-psutil is listed as an optional dependency, but the of the latest version requires it for installation.

op3 commented on 2019-02-16 19:44

xrootd is now in community and the python-bindings are in python-xrootd, so the optdepends have to be updated.

flying-sheep commented on 2018-12-07 11:38

done, thank you

a-ludi commented on 2018-12-06 08:20

The installation routine of this package depends on python-gitpython. Please add it to makedepends.

op3 commented on 2018-11-10 12:48

Optional dependencies:

  • python-jinja2 is now named python-jinja
  • python-biopython for GenBank/NCBI Entrez support
  • python-python-easywebdav for WebDAV support
  • python-pysftp for SFTP support
  • python-boto3 for AWS support
  • python-moto for AWS support
  • python-dropbox for Dropbox support
  • python-ftputil for FTP support
  • xrootd for XRootD support
  • python-psutil for benchmarking

$PKGDIR in PYTHONPATH (at the very end of the PKGBUILD) has to be replaced by $pkgdir.