Search Criteria
Package Details: r-rsamtools 2.4.0-1
| Git Clone URL: | https://aur.archlinux.org/r-rsamtools.git (read-only, click to copy) |
|---|---|
| Package Base: | r-rsamtools |
| Description: | Binary alignment (BAM), FASTA, variant call (BCF), and tabix file import |
| Upstream URL: | https://bioconductor.org/packages/release/bioc/html/Rsamtools.html |
| Licenses: | |
| Submitter: | greyltc |
| Maintainer: | greyltc (dviktor) |
| Last Packager: | dviktor |
| Votes: | 0 |
| Popularity: | 0.000000 |
| First Submitted: | 2019-02-09 14:35 |
| Last Updated: | 2020-04-30 10:48 |
Dependencies (24)
- r (r-mkl, microsoft-r-open)
- r-biocparallel
- r-bitops
- r-zlibbioc
- r-s4vectors>=0.17.25
- r-xvector>=0.19.7
- r-biocgenerics>=0.25.1
- r-genomeinfodb>=1.1.3
- r-rhtslib>=1.17.7
- r-genomicranges>=1.31.8
- r-iranges>=2.13.12
- r-biostrings>=2.47.6
- gcc (gcc-multilib-x32, gcc6-gcccompat, fastgcc, gcc-multilib-git, gcc-git) (make)
- make (make3, make-git, make-without-guile) (make)
- r-biocstyle (optional)
- r-bsgenome.hsapiens.ucsc.hg19 (optional)
- r-genomicalignments (optional)
- r-genomicfeatures (optional)
- r-kegg.db (optional)
- r-rnaseqdata.hnrnpc.bam.chr14 (optional)
- r-runit (optional)
- r-shortread (optional)
- r-txdb.dmelanogaster.ucsc.dm3.ensgene (optional)
- r-txdb.hsapiens.ucsc.hg18.knowngene (optional)
Required by (8)
- python-q2-dada2
- r-biocgenerics (optional)
- r-biocparallel (optional)
- r-genomeinfodb (optional)
- r-genomicalignments
- r-genomicranges (optional)
- r-iranges (optional)
- r-shortread