Package Details: r-genomicranges 1.42.0-1

Git Clone URL: https://aur.archlinux.org/r-genomicranges.git (read-only, click to copy)
Package Base: r-genomicranges
Description: Representation and manipulation of genomic intervals
Upstream URL: https://bioconductor.org/packages/release/bioc/html/GenomicRanges.html
Licenses: Artistic-2.0
Submitter: greyltc
Maintainer: greyltc (dviktor)
Last Packager: dviktor
Votes: 0
Popularity: 0.000000
First Submitted: 2019-02-09 14:26
Last Updated: 2020-10-30 19:58

Dependencies (39)

  • r-biocgenerics>=0.25.3
  • r-s4vectors>=0.27.12
  • r-xvector>=0.29.2
  • r-genomeinfodb>=1.15.2
  • r>=2.10 (microsoft-r-open, r-mkl)
  • r-iranges>=2.23.9
  • bsgenome.mmusculus.ucsc.mm10 (optional)
  • r-annotate (optional)
  • r-annotationdbi (optional)
  • r-annotationhub (optional)
  • r-biobase (optional)
  • r-biocstyle (optional)
  • r-biostrings (optional)
  • r-bsgenome (optional)
  • r-bsgenome.hsapiens.ucsc.hg19 (optional)
  • r-bsgenome.scerevisiae.ucsc.saccer2 (optional)
  • r-deseq2 (optional)
  • r-dexseq (optional)
  • r-digest (optional)
  • r-edger (optional)
  • r-genomicalignments (optional)
  • r-genomicfeatures (optional)
  • r-gviz (optional)
  • r-hgu95av2.db (optional)
  • r-hgu95av2probe (optional)
  • r-kegg.db (optional)
  • r-kegggraph (optional)
  • r-knitr (optional)
  • r-pasillabamsubset (optional)
  • r-rnaseqdata.hnrnpc.bam.chr14 (optional)
  • r-rsamtools (optional)
  • r-rtracklayer (optional)
  • r-runit (optional)
  • r-summarizedexperiment (optional)
  • r-txdb.athaliana.biomart.plantsmart22 (optional)
  • r-txdb.hsapiens.ucsc.hg19.knowngene (optional)
  • r-txdb.mmusculus.ucsc.mm10.knowngene (optional)
  • r-variantannotation (optional)
  • txdb.dmelanogaster.ucsc.dm3.ensgene (optional)

Sources (1)

Latest Comments

vejnar commented on 2019-02-15 20:24

Building is failing. GenomicRanges depends on XVector. Please add r-xvector in depencencies.