Package Details: itk-snap 3.8.2-1

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Package Base: itk-snap
Description: Software to segment structures in 3D medical images
Upstream URL:
Licenses: GPL3
Submitter: m-pilia
Maintainer: m-pilia
Last Packager: m-pilia
Votes: 1
Popularity: 0.000126
First Submitted: 2018-04-27 06:42
Last Updated: 2021-03-27 21:51

Latest Comments

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m-pilia commented on 2021-03-27 21:57

Sorry for the long delay. I pushed an update to version 3.8.2 from master branch. I skipped version 3.8.0 (latest "stable" release) because it fails to build with any reasonable settings (and even 3.8.2 required several fixes in order to build, cf. patch).

Since the application is not compatible with ITK 5, I created the insight-toolkit4 package, that is required as a dependency.

m-pilia commented on 2021-02-23 20:27

NOTE: Unfortunately ITK Snap does not build against ITK 5 and VTK 8. Making this package work again will probably require to either package insight-toolkit4 and build against it and vtk6, or do a superbuild and install in /opt.

m-pilia commented on 2019-06-20 17:29

@astewartau: It seems you updated ITK and did not re-build ITK-SNAP afterwards, so it cannot find the dynamic libraries of ITK (since it is still linked to the old version).

astewartau commented on 2019-06-20 05:23

I get this error on attempting to run itksnap:

/usr/lib/snap-3.6.0/ITK-SNAP: error while loading shared libraries: cannot open shared object file: No such file or directory

huyz commented on 2019-05-29 03:46

@m-pilia Got it, thx.

One of the 3rd party repo I used has upgrade ITK to 5.0.0

m-pilia commented on 2019-05-28 15:46

@huyizheng: Are you using itk-git by chance? Because it seems your installation of ITK is missing the "itkVectorResampleImageFilter.h" header, that was deprecated a couple weeks ago. This package should build fine with ITK 4.13.1, but I am not sure it works with ITK 5.0.0.

huyz commented on 2019-05-28 14:42

I got this error:

[  0%] Building CXX object Submodules/greedy/CMakeFiles/greedyapi.dir/src/lddmm_data.cxx.o
/home/abc/.cache/yay/itk-snap/src/itk-snap/Submodules/greedy/src/lddmm_data.cxx:47:10: fatal error: itkVectorResampleImageFilter.h: No such file or directory
#include "itkVectorResampleImageFilter.h"
compilation terminated.
make[2]: *** [Submodules/greedy/CMakeFiles/greedyapi.dir/build.make:63: Submodules/greedy/CMakeFiles/greedyapi.dir/src/lddmm_data.cxx.o] Error 1
make[1]: *** [CMakeFiles/Makefile2:838: Submodules/greedy/CMakeFiles/greedyapi.dir/all] Error 2
make: *** [Makefile:163: all] Error 2
==> ERROR: A failure occurred in build().

m-pilia commented on 2019-04-17 18:19

@asterwartau: Fixed, thanks! I must have missed it in the output of namcap.

astewartau commented on 2019-04-17 08:59

Me again! I believe there is now a runtime (but not a build) dependency on libjson-rpc-cpp-git as I receive the following error on launch without it:

/usr/lib/snap-3.6.0/ITK-SNAP: error while loading shared libraries: cannot open shared object file: No such file or directory

m-pilia commented on 2019-04-07 19:31

Thanks @astewartau, I updated the dependencies. It was a few months I did not build this, and I think something changed in how VTK is packaged.