Package Details: cufflinks-bin 2.2.1-1

Git Clone URL: (read-only, click to copy)
Package Base: cufflinks-bin
Description: Transcriptome assembly and differential expression analysis for RNA-Seq.
Upstream URL:
Keywords: science
Licenses: Boost Software License v1
Conflicts: cufflinks
Provides: cufflinks=2.2.1
Submitter: vejnar
Maintainer: vejnar
Last Packager: vejnar
Votes: 2
Popularity: 0.000000
First Submitted: 2015-06-20 00:03
Last Updated: 2015-06-20 00:05

Latest Comments

micwoj92 commented on 2021-05-14 17:21

Hello, could you update links to https?

Rhinoceros commented on 2016-09-06 05:21

Cuffmerge is written in python2, but Arch uses python 3 by default. Hence it fails.

$ cuffmerge
File "/usr/bin/cuffmerge", line 95
except getopt.error, msg:
SyntaxError: invalid syntax

Please add python2 as a dependency, and patch cuffmerge (probably easiest is to modify the shebang).