47 packages found. Page 1 of 1.

Name Version Votes Popularity? Description Maintainer
abyss 2.3.1-1 1 0.00 Assembly By Short Sequences - a de novo, parallel, paired-end sequence assembler PolpOnline
andi 0.13-1 0 0.00 Rapid estimation of evolutionary distances kloetzl
bandage 0.8.1-1 0 0.00 Bioinformatics Application for Navigating De novo Assembly Graphs Easily aorth
bioperl-live-git 20161203-1 1 0.00 Perl modules for bioinformatics applications. Ordoban
bioperl-run-git 20161220-1 1 0.00 Wrapper modules around many common bioinformatics applications and tools. Ordoban
canu 1.9-1 0 0.00 Fork of the Celera Assembler, designed for high-noise single-molecule sequencing (such as the PacBio RS II/Sequel or Oxford Nanopore MinION) orphan
diamond-aligner-git 0.9.27.r1.g58ee82e-1 0 0.00 Accelerated BLAST compatible local sequence aligner orphan
dnastar7activated 7.1.0-1 0 0.00 leader in the field of bioinformatics software, including SeqMan Editseq GeneQuest Megalign PrimerSelect Protean SeqBuilder malacology
genometools 1.5.10-1 0 0.00 A unified set of bioinformatics tools for analyzing genomes mrwillbarnz
haskell-bio 0.5.3-1 1 0.00 A bioinformatics library mrwillbarnz
hhsuite 3.2.0-1 1 0.00 A set of programs for protein sequence homology detection by iterative HMM-HMM comparison for computational biology like PSI-BLAST semi
libmaus 2.0.504-2 1 0.00 Bioinformatics data structures and algorithms in C++ navigaid
mash 2.3-1 0 0.00 Fast genome and metagenome distance estimation using MinHash kloetzl
merlin-linkage 1.1.2-1 0 0.00 Bioinformatics linkage analysis tool alex.henrie
mothur 1.45.3-1 1 0.00 A bioinformatics program for analyzing microbial communities. meanjollies
phylonium 1.5-1 0 0.00 Fast and Accurate Estimation of Evolutionary Distances kloetzl
pirsf 80.00-1 0 0.00 The Protein Information Resource (PIR) is an integrated public bioinformatics resource to support genomic, proteomic and systems biology research and scientific studies. anadon
python-crimson 0.3.0-1 0 0.00 Bioinformatics tool outputs converter to JSON or YAML mrwillbarnz
python-pybedtools 0.7.10-4 0 0.00 Python wrapper for the bioinformatics genomic arithmetic tool bedtools mrwillbarnz
python-pybedtools-git 0.7.10.r25.g9ab3ff6-2 0 0.00 Python wrapper for the bioinformatics genomic arithmetic tool bedtools mrwillbarnz
python-sample-sheet 0.1.1-1 0 0.00 A bioinformatics Illumina Sample Sheet parsing utility mrwillbarnz
python2-bxpython 0.7.3-1 0 0.00 Tools for manipulating biological data, particularly multiple sequence alignments orphan
python2-crimson 0.3.0-1 0 0.00 Bioinformatics tool outputs converter to JSON or YAML mrwillbarnz
python2-cruzdb 0.5.6-3 0 0.00 Pythonic interface to the bioinformatics UCSC genome databses mrwillbarnz
python2-pybedtools 0.7.10-4 0 0.00 Python wrapper for the bioinformatics genomic arithmetic tool bedtools mrwillbarnz
python2-pybedtools-git 0.7.10.r25.g9ab3ff6-2 0 0.00 Python wrapper for the bioinformatics genomic arithmetic tool bedtools mrwillbarnz
salmon 1.4.0-1 0 0.00 Highly-accurate & wicked fast transcript-level quantification from RNA-seq reads using lightweight alignments sauliusl
sniffles 1.0.11-1 0 0.00 Structural variation caller using third generation sequencing tmiller
stringtie 2.0.4-1 0 0.00 A fast and highly efficient assembler of RNA-Seq alignments into potential transcripts orphan
tabnetviz 1.1.0-1 0 0.00 Table-based network visualizer orphan
ucsc-kent-genome-tools 405-1 4 0.00 UCSC Kent bioinformatics utilities: kent source utilities greyltc
kallisto 0.46.1-1 2 0.00 Quantify abundances of transcripts from RNA-Seq data flying-sheep
artemis 18.1.0-1 2 0.00 A genome viewer and annotation tool that visualizes biological sequence features mrwillbarnz
centrifuge 1.0.4-1 1 0.00 Bioinformatics taxonomic classifier for microbial classification mrwillbarnz
centrifuge-bin 1.0.4-1 1 0.00 Bioinformatics taxonomic classifier for microbial classification mrwillbarnz
freebayes 1.2.0-1 2 0.00 A tool for finding polymorphisms in high throughput sequence data. mrwillbarnz
gatk 2:4.0.7.0-1 1 0.00 Variant discovery in high-throughput bioinformatics sequencing data mrwillbarnz
igvtools 2.4.17-1 2 0.00 IGV utilities for preprocessing bioinformatics data files mrwillbarnz
verifybamid 1.1.3-1.1 1 0.00 Verify identity and purity of sequence data mrwillbarnz
biobambam 2.0.87-1 1 0.00 BAM file pre-processing utilities for bioinformatics. mrwillbarnz
gatk-bin 4.0.6.0-1 1 0.00 Variant discovery in high-throughput bioinformatics sequencing data orphan
python-multiqc 1.4-2 2 0.00 Create aggregate bioinformatics analysis reports across many samples and tools mrwillbarnz
python2-multiqc 1.4-2 2 0.00 Create aggregate bioinformatics analysis reports across many samples and tools mrwillbarnz
meme 5.2.0-1 7 0.02 The MEME suite provides tools for discovering and using protein and DNA sequence motifs allencch
jalview 2.11.1.4-1 12 0.23 Bioinformatics Multiple Alignment Editor PumpkinCheshire
python-scikit-bio 0.5.6-1 1 0.23 Python package providing data structures, algorithms, and educational resources for bioinformatics greyltc
mygnuhealth 1.0.3-1 3 1.98 The GNU Health Personal Health Record (PHR) meanmicio

47 packages found. Page 1 of 1.