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authorZJLIN2016-04-15 22:18:17 +0800
committerZJLIN2016-04-15 22:18:17 +0800
commit8a4b949ebd0c2c39f7e3c32429ec0c8ac4e4fd35 (patch)
tree5e1d6fb44f3c19af91202d2bac15f221d0dbb7d7
parent61ff5cc4a1762647c590ff960304ace7c327cd06 (diff)
downloadaur-8a4b949ebd0c2c39f7e3c32429ec0c8ac4e4fd35.tar.gz
update to 0.36
-rw-r--r--.SRCINFO8
-rw-r--r--PKGBUILD20
2 files changed, 13 insertions, 15 deletions
diff --git a/.SRCINFO b/.SRCINFO
index be355a47986..ef6e6afefa6 100644
--- a/.SRCINFO
+++ b/.SRCINFO
@@ -1,15 +1,13 @@
-# Generated by mksrcinfo v8
-# Thu Mar 10 15:01:41 UTC 2016
pkgbase = trimmomatic
pkgdesc = Trimmomatic: A flexible read trimming tool for Illumina NGS data
- pkgver = 0.35
+ pkgver = 0.36
pkgrel = 1
url = http://www.usadellab.org/cms/?page=trimmomatic
arch = any
license = GPL3
depends = java-environment>=6
- source = http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.35.zip
- md5sums = 564e62f4f0f9f56d22762b237d4c69c4
+ source = http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-0.36.zip
+ md5sums = 8549130d86b6f0382b1a71a2eb45de39
pkgname = trimmomatic
diff --git a/PKGBUILD b/PKGBUILD
index 596d194c00b..3c61785b93c 100644
--- a/PKGBUILD
+++ b/PKGBUILD
@@ -1,6 +1,6 @@
# Maintainer: ZJLIN <zjin841126@gmail.com>
pkgname=trimmomatic
-pkgver=0.35
+pkgver=0.36
pkgrel=1
pkgdesc='Trimmomatic: A flexible read trimming tool for Illumina NGS data'
arch=('any')
@@ -8,16 +8,16 @@ url="http://www.usadellab.org/cms/?page=trimmomatic"
license=('GPL3')
depends=('java-environment>=6')
source=("http://www.usadellab.org/cms/uploads/supplementary/Trimmomatic/Trimmomatic-$pkgver.zip")
-md5sums=('564e62f4f0f9f56d22762b237d4c69c4')
+md5sums=('8549130d86b6f0382b1a71a2eb45de39')
package() {
- mkdir $pkgdir/opt/
- mv $srcdir/Trimmomatic-$pkgver $srcdir/Trimmomatic
- cp -r $srcdir/Trimmomatic/ $pkgdir/opt/
+ mkdir $pkgdir/opt/
+ mv $srcdir/Trimmomatic-$pkgver $srcdir/Trimmomatic
+ cp -r $srcdir/Trimmomatic/ $pkgdir/opt/
- mkdir -p "${pkgdir}/usr/bin/"
- execmd=("exec java -jar /opt/Trimmomatic/trimmomatic-$pkgver.jar"' "$@"')
- echo $execmd > $pkgdir/opt/Trimmomatic/trimmomatic
- chmod 755 $pkgdir/opt/Trimmomatic/trimmomatic
- ln -s "/opt/Trimmomatic/trimmomatic" "${pkgdir}/usr/bin"
+ mkdir -p "${pkgdir}/usr/bin/"
+ execmd=("exec java -jar /opt/Trimmomatic/trimmomatic-$pkgver.jar"' "$@"')
+ echo $execmd > $pkgdir/opt/Trimmomatic/trimmomatic
+ chmod 755 $pkgdir/opt/Trimmomatic/trimmomatic
+ ln -s "/opt/Trimmomatic/trimmomatic" "${pkgdir}/usr/bin"
}