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authormschubert2015-06-12 12:09:33 +0100
committermschubert2015-06-12 12:09:33 +0100
commit9666c6a7f654df75811e7989de562600e6870c58 (patch)
treeddbaec35c8f40b2be299e2c005f64026c278ae71
downloadaur-9666c6a7f654df75811e7989de562600e6870c58.tar.gz
Initial import
-rw-r--r--.AURINFO14
-rw-r--r--.SRCINFO15
-rw-r--r--PKGBUILD26
3 files changed, 55 insertions, 0 deletions
diff --git a/.AURINFO b/.AURINFO
new file mode 100644
index 00000000000..d4609120fc2
--- /dev/null
+++ b/.AURINFO
@@ -0,0 +1,14 @@
+pkgbase = tcoffee
+ pkgdesc = An alignment tool for Protein, DNA and RNA sequences
+ pkgver = 11.00.8cbe486
+ pkgrel = 1
+ url = http://www.tcoffee.org/Projects/tcoffee/
+ arch = i686
+ arch = x86_64
+ license = GPL2
+ depends = gcc-libs
+ depends = gcc-fortran
+ source = http://www.tcoffee.org/Packages/Stable/Latest/T-COFFEE_distribution_Version_11.00.8cbe486.tar.gz
+
+pkgname = tcoffee
+
diff --git a/.SRCINFO b/.SRCINFO
new file mode 100644
index 00000000000..eadf66146a1
--- /dev/null
+++ b/.SRCINFO
@@ -0,0 +1,15 @@
+pkgbase = tcoffee
+ pkgdesc = An alignment tool for Protein, DNA and RNA sequences
+ pkgver = 11.00.8cbe486
+ pkgrel = 1
+ url = http://www.tcoffee.org/Projects/tcoffee/
+ arch = i686
+ arch = x86_64
+ license = GPL2
+ depends = gcc-libs
+ depends = gcc-fortran
+ source = http://www.tcoffee.org/Packages/Stable/Latest/T-COFFEE_distribution_Version_11.00.8cbe486.tar.gz
+ md5sums = bd91485c06eda4f2ffcb61542d3ce302
+
+pkgname = tcoffee
+
diff --git a/PKGBUILD b/PKGBUILD
new file mode 100644
index 00000000000..5ffc89b900f
--- /dev/null
+++ b/PKGBUILD
@@ -0,0 +1,26 @@
+# Maintainer: Michael Schubert <mschu.dev at gmail>
+# Contributor: Mick Elliot <micke at sfu dot ca>
+# Contributor: Damir Perisa <damir.perisa@bluewin.ch>
+
+pkgname=tcoffee
+pkgver=11.00.8cbe486
+pkgrel=1
+arch=('i686' 'x86_64')
+license=('GPL2')
+pkgdesc="An alignment tool for Protein, DNA and RNA sequences"
+url="http://www.tcoffee.org/Projects/tcoffee/"
+depends=('gcc-libs' 'gcc-fortran')
+source=("http://www.tcoffee.org/Packages/Stable/Latest/T-COFFEE_distribution_Version_$pkgver.tar.gz")
+md5sums=('bd91485c06eda4f2ffcb61542d3ce302')
+
+build() {
+ cd "$srcdir/T-COFFEE_distribution_Version_$pkgver/t_coffee_source"
+ make FCC=gfortran all
+}
+
+package() {
+ cd "$srcdir/T-COFFEE_distribution_Version_$pkgver/t_coffee_source"
+ install -Dm755 t_coffee "$pkgdir/usr/bin/t_coffee"
+ install -Dm755 TMalign "$pkgdir/usr/bin/TMalign"
+}
+